Yıldız Teknik Üniversitesi
Akademik Veri Yönetim Sistemi
Yayınlar & Eserler
SCI,SSCI,AHCI İNDEKSLERİNE GİREN DERGİLERDE YAYINLANAN MAKALELER
Ouma W.Z., Mejia-Guerra M.K., Yilmaz A., Pareja-Tobes P., Li W., Doseff A.I., et al., "Important biological information uncovered in previously unaligned reads from chromatin immunoprecipitation experiments (ChIP-Seq)", SCIENTIFIC REPORTS, vol.5, 2015
Arango D., Morohashi K., Yilmaz A., Kuramochi K., Parihar A., Brahimaj B., et al.,"Molecular basis for the action of a dietary flavonoid revealed by the comprehensive identification of apigenin human targets", PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, vol.110, pp.E2153-E2162, 2013
Morohashi K., Casas M.I., Falcone Ferreyra L., Mejia-Guerra M.K., Pourcel L., Yilmaz A., et al.,"A Genome-Wide Regulatory Framework Identifies Maize Pericarp Color1 Controlled Genes", PLANT CELL, vol.24, pp.2745-2764, 2012
Bolduc N., Yilmaz A., Mejia-Guerra M.K., Morohashi K., O'Connor D., Grotewold E., et al.,"Unraveling the KNOTTED1 regulatory network in maize meristems", GENES & DEVELOPMENT, vol.26, pp.1685-1690, 2012
Sharma A., Yilmaz A., Marsh K., Cochrane A., Boris-Lawrie K., "Thriving under Stress: Selective Translation of HIV-1 Structural Protein mRNA during Vpr-Mediated Impairment of eIF4E Translation Activity", PLOS PATHOGENS, vol.8, 2012
Yilmaz A., Mejia-Guerra M.K., Kurz K., Liang X., Welch L., Grotewold E., "AGRIS: the Arabidopsis Gene Regulatory Information Server, an update", NUCLEIC ACIDS RESEARCH, vol.39, pp.D1118-D1122, 2011
Lichtenberg J., Yilmaz A., Welch J.D., Kurz K., Liang X., Drews F., et al.,"The word landscape of the non-coding segments of the Arabidopsis thaliana genome", BMC GENOMICS, vol.10, 2009
Yilmaz A., Nishiyama M.Y., Fuentes B.G., Souza G.M., Janies D., Gray J., et al.,"GRASSIUS: A Platform for Comparative Regulatory Genomics across the Grasses", PLANT PHYSIOLOGY, vol.149, pp.171-180, 2009
Nadella M.V.P., Kisseberth W.C., Nadella K.S., Thudi N.K., Thamm D.H., Mcniel E.A., et al.,"NOD/SCID mouse model of canine T-cell lymphoma with humoral hypercalcaemia of malignancy: cytokine gene expression profiling and in vivo bioluminescent imaging", VETERINARY AND COMPARATIVE ONCOLOGY, vol.6, pp.39-54, 2008
Bolinger C., Yilmaz A., Hartman T.R., Kovacic M.B., Fernandez S., Ye J., et al.,"RNA helicase A interacts with divergent lymphotropic retroviruses and promotes translation of human T-cell leukemia virus type 1", NUCLEIC ACIDS RESEARCH, vol.35, pp.2629-2642, 2007
Yilmaz A., Fernandez S., Lairmore M.D., Boris-Lawrie K., "Coordinate enhancement of transgene transcription and translation in a lentiviral vector", RETROVIROLOGY, vol.3, 2006
Yilmaz A., Bolinger C., Boris-Lawrie K., "Retrovirus translation initiation: Issues and hypotheses derived from study of HIV-1", CURRENT HIV RESEARCH, vol.4, pp.131-139, 2006
DİĞER DERGİLERDE YAYINLANAN MAKALELER
Cannon E., Birkett S., Braun B., Kodavali S., Jennewein D., Yilmaz A., et al.,"POPcorn: an online resource providing access to distributed and diverse maize project data", International Journal of Plant Genomics, vol.2011, 2011 (Link)
HAKEMLİ KONGRE / SEMPOZYUMLARIN BİLDİRİ KİTAPLARINDA YER ALAN YAYINLAR
Konuk H.B., Cesur M.R., Yilmaz A., "IDENTIFICATION of TISSUE SPECIFIC GENES and ASSESMENT of THEIR INTERSECTION WITH DIFFERENTIALY EXPRESSED GENES in CANCER DATA to UNDERSTAND TUMOR HETEROGENEITY IN SILICO", 10 th International Symposium on Health Informatics and Bioinformatics, Güzelyurt, KUZEY KIBRIS TÜRK CUM., 28-30 Haziran 2017, pp.0-0
Yilmaz A., Konuk H.B., "GENERATING LOSSLESS COMPRESSION OF GENOME SCALE K-MER FREQUENCY TABLE AS RASTER IMAGE", International Congress on Advances in Bioscience and Biotechnology, Saraybosna, BOSNA HERSEK,
Yilmaz A., Konuk H.B., "RIGOROUS IDENTIFICATION OF TISSUE SPECIFIC GENES IN SILICO: REVEALING THE INTERPLAY BETWEEN CANCER SPECIFIC EXPRESSION AND TISSUE SPECIFIC EXPRESSION", International Congress on Advances in Bioscience and Biotechnology, Saraybosna, BOSNA HERSEK,
Kalyon O., Yilmaz A., "SURVEY OF CHIMERIC mRNAs IN HIV INFECTED PATIENT RNA-SEQ DATA", INTERNATIONAL DNA DAY AND GENOME CONGRESS (IDDGC) 2017, KIRŞEHİR, TÜRKIYE, 24-28 Nisan 2017, pp.0-0
Konuk H.B., Yilmaz A., "Robust and Rigorous Classification of Tissue Specific Genes", INTERNATIONAL DNA DAY AND GENOME CONGRESS (IDDGC) 2017, KIRŞEHİR, TÜRKIYE, 24-28 Nisan 2017, pp.0-0
Kalyon O., Yilmaz A., "SURVEY OF CHIMERIC mRNAs IN HIV INFECTED PATIENT RNA-SEQ DATA", 10th International Symposium on Health Informatics and Bioinformatics, Güzelyurt, KUZEY KIBRIS TÜRK CUM., 28-30 Haziran 2017, pp.0-0
Yilmaz A., Mustafa Ö., Aydin N., "A novel method for splice sites prediction using sequence component and hidden Markov model", 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Orlando, FL, USA, A.B.D.,
Özçirak Ş., Yilmaz A., "Protein engineering insights from metagenomes of diverse bacteria", 41st FEBS Congress, Muğla, ,
Pashaei E., Yilmaz A., Aydin N., "A combined SVM and Markov model approach for splice site identification", 2016 6th International Conference on Computer and Knowledge Engineering (ICCKE), Mashhad, Iran, IRAN,
Zor S., Yilmaz A., "Utilization of Multiple Mapped Sequences in Next Generation Sequencing Especially in Chip Seq Experiments", International Health Informatics and Bioinformatics Symposium, Muğla, TÜRKIYE,
Lichtenberg J., Alam M., Bitterman T., Drews F., Ecker K., Elnitski L., et al.,"Construction of genomic regulatory encyclopedias: Strategies and case studies", Proceedings of the Ohio Collaborative Conference on Bioinformatics, , Haziran 2009 (Link)
Yilmaz A., Palaniswamy S., Davuluri R., Grotewold E., "Discovery of regulatory networks in plants by linking promoter and transcription factor databases.", Proceedings of the Ohio Collaborative Conference on Bioinformatics, , Haziran 2009 (Link)
KİTAP ve KİTAP BÖLÜMLERİ
Lichtenberg J., Yilmaz A., Kurz K., Liang X., Nelson C., Bitterman T., et al.,"", World Scientific Publishing Company, Hackensack, NJ, pp.159-178, 2011 (Link)
Yilmaz A., Grotewold E., "", Humana Press, Totowa, NJ, pp.23-32, 2010 (Link)
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