Publications & Works

Publication Network
Articles 12
All (12)
SCI-E, SSCI, AHCI (10)
SCI-E, SSCI, AHCI, ESCI (12)
ESCI (1)
Scopus (12)

1. Exploring β-glucosidase activity in lactic acid bacteria isolated from natural and alkaline-treated Turkish table olives: a molecular and biochemical approach

Mumcu A., Altuntaş E. G., Sözbilen G. S., Güngör F. Ö., Sevim B., Deliboran A., et al.
EUROPEAN FOOD RESEARCH AND TECHNOLOGY , vol.252, no.1, 2025 (SCI-Expanded, Scopus)

2. A systematic review of health promoting effects of consumption of whey-based fermented products on adults

Sar T., Bogovic Matijasic B., Gündüz Ergün B.
FRONTIERS IN NUTRITION , vol.12, pp.1-21, 2025 (SCI-Expanded, Scopus) Creative Commons License Sustainable Development

3. A systematic review on the health effects of fermented wheat germ extract with emphasis on cancer

BERKEL KAŞIKÇI M., Issa A., BAĞLAM N., DİNÇER E., Gérard A., Kabakci S., et al.
Frontiers in Nutrition , vol.12, 2025 (SCI-Expanded, Scopus)

4. Health benefits and risks of fermented foods—the PIMENTO initiative

Todorovic S., Akpinar A., Assunção R., Bär C., Bavaro S. L., Berkel Kasikci M., et al.
Frontiers in Nutrition , vol.11, 2024 (SCI-Expanded, Scopus) Sustainable Development

5. Second generation Pichia pastoris strain and bioprocess designs

Ergün B., Laçın K., Çaloğlu B., Binay B.
Biotechnology for Biofuels and Bioproducts , vol.15, no.1, 2022 (Scopus) Sustainable Development

6. What makes Komagataella phaffii non-conventional?

Ata Ö., Ergün B., Fickers P., Heistinger L., Mattanovich D., Rebnegger C., et al.
FEMS Yeast Research , vol.21, no.8, 2021 (SCI-Expanded, Scopus)

7. Interactions between Teladorsagia circumcincta Infections and Microbial Composition of Sheep with or without Successful Monepantel Treatment—A Preliminary Study

Watkins C. A., Bartley D. J., Ergün B., Yıldızhan B., Ross-Watt T., Morrison A. A., et al.
Ruminants , vol.1, no.1, pp.31-45, 2021 (Scopus)

8. Recombinant protein production in Pichia pastoris: From transcriptionally redesigned strains to bioprocess optimization and metabolic modelling

Ergün B., Berrios J., Binay B., Fickers P.
FEMS Yeast Research , vol.21, no.7, 2021 (SCI-Expanded, Scopus)

9. Engineered Deregulation of Expression in Yeast with Designed Hybrid-Promoter Architectures in Coordination with Discovered Master Regulator Transcription Factor

Ergün B., Demir İ., Özdamar T. H., Gasser B., Mattanovich D., ÇALIK P.
Advanced Biosystems , vol.4, no.4, 2020 (SCI-Expanded, ESCI, Scopus)

10. Engineering of alcohol dehydrogenase 2 hybrid-promoter architectures in Pichia pastoris to enhance recombinant protein expression on ethanol

Ergün B., Gasser B., Mattanovich D., ÇALIK P.
Biotechnology and Bioengineering , vol.116, no.10, pp.2674-2686, 2019 (SCI-Expanded, Scopus)

11. Double promoter expression systems for recombinant protein production by industrial microorganisms

Öztürk S., Ergün B., ÇALIK P.
Applied Microbiology and Biotechnology , vol.101, no.20, pp.7459-7475, 2017 (SCI-Expanded, Scopus) Sustainable Development

12. Lignocellulose degrading extremozymes produced by Pichia pastoris: Current status and future prospects

Gündüz Ergün B., ÇALIK P.
Bioprocess and Biosystems Engineering , vol.39, no.1, pp.1-36, 2016 (SCI-Expanded, Scopus)
Papers Presented at Peer-Reviewed Scientific Conferences 9

1. Living biocatalysts

Gündüz Ergün B.
EBDays2024/5th International Enzyme and Bioprocess Days, EBDays2024, İzmir, Turkey, 27 - 29 August 2024, pp.20, (Summary Text) Sustainable Development

2. Synthetic Control over Pichia pastoris Expression System: From Promoter Engineering to Transcriptional Circuitry Redesign

Gündüz Ergün B., Gasser B., Mattanovich D., Çalık P.
RPP11 / 11th Conference on Recombinant Protein Production, Girona, Spain, 17 - 19 October 2023, pp.103, (Summary Text) Sustainable Development

3. Living Therapeutic Design for Pernicious Anemia by Engineering Probiotic Yeast with Synthetic Biology Approaches

Gündüz Ergün B., Albayrak D., Şeker U. Ö. Ş.
FEMS 2023 / 10th Congress of European Microbiologists, Hamburg, Germany, 9 - 13 July 2023, pp.1104, (Summary Text) Sustainable Development

4. Novel genetic tools for Pichia pastoris strain engineering

Gündüz Ergün B.
EBDays2022/3rd International Enzyme and Bioprocess Days, Tokat, Turkey, 9 - 11 September 2022, pp.23, (Summary Text) Sustainable Development

5. Yr15 Screening of Turkish Bread Wheat Varieties Using KASP Markers for Warrior, A New Race of Stripe Rust Pathogen (Puccinia striiformis) on Wheat in Turkey

Ölmez F., Akan K., Maraş Vanlıoğlu F., Uslu T., Gündüz Ergün B.
Plant Health: Challenges Solutions, Antalya, Turkey, 23 - 28 April 2017, pp.41, (Summary Text) Sustainable Development

6. Potential applications of transglutaminase enzyme in cereal products

Gündüz Ergün B.
15th ICBC/15th International Cereal and Bread Congress, İstanbul, Turkey, 16 - 21 April 2016, pp.189, (Summary Text) Sustainable Development

7. Extracellular microbial pro-transglutaminase production by recombinant Pichia pastoris

Gündüz Ergün B.
Pichia 2016, Antalya, Turkey, 3 - 06 April 2016, pp.63, (Summary Text) Sustainable Development

8. Recombinant transglutaminase production by metabolically engineered Pichia pastoris

Gündüz Ergün B., Yılmaz R., Çalık P.
ECB15/15th European Congress on Biotechnology, İstanbul, Turkey, 23 - 26 September 2012, pp.80, (Summary Text) Sustainable Development

9. Transglutaminase Production Using Modified Pichia pastoris with Metabolic Engineering

Gündüz Ergün B., Çalık P.
International Food, Agriculture and Gastronomy Congress, Antalya, Turkey, 15 - 19 February 2012, pp.245-246, (Summary Text) Sustainable Development
Books 3

1. Hybrid architectured promoter design to engineer expression in yeast

Gündüz Ergün B., Çalık P.
in: Methods in Enzymology - Recombinant Protein Expression: Eucaryotic Hosts, William B O'Dell,Zvi Kelman, Editor, Academic Press , London, pp.81-104, 2021 Creative Commons License Sustainable Development

2. Hybrid-architectured promoter design to deregulate expression in yeast

Gündüz Ergün B., Çalık P.
in: Methods in Enzymolology - Recombinant Protein Expression: Eukaryotic Hosts, WILLIAM B. O’DELL,ZVI KELMAN, Editor, Academic Press , London, pp.105-128, 2019 Creative Commons License Sustainable Development

3. Established and upcoming yeast expression systems

Gündüz Ergün B., Çelik Akdur E., Çalık P.
in: Recombinant Protein Production in Yeast, Brigitte Gasser,Diethard Mattanovich, Editor, Humana Press, Inc. , New York, pp.1-74, 2019 Creative Commons License Sustainable Development
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24

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12

Publication (Scopus)

12

Citation (WoS)

362

H-Index (WoS)

8

Citation (Scopus)

451

H-Index (Scopus)

10

Citation (Scholar)

556

H-Index (Scholar)

11

Citation (Sum Other)

1

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12

Intellectual Property

2

Open Access

3
UN Sustainable Development Goals
SDG 2: GOAL 2: ZERO HUNGER
SDG 3: GOAL 3: GOOD HEALTH AND WELL-BEING
SDG 4: GOAL 4: QUALITY EDUCATION
SDG 6: GOAL 6: CLEAN WATER AND SANITATION
SDG 7: GOAL 7: AFFORDABLE AND CLEAN ENERGY
SDG 8: GOAL 8: DECENT WORK AND ECONOMIC GROWTH
SDG 9: GOAL 9: INDUSTRIAL INNOVATION AND INFRASTRUCTURE
SDG 11: GOAL 11: SUSTAINABLE CITIES AND COMMUNITIES
SDG 12: GOAL 12: RESPONSIBLE CONSUMPTION AND PRODUCTION
SDG 15: GOAL 15: LIFE ON LAND